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YALEPIC® Single-Cell WGA Kit

Precision for Every Read — Robust Kit for single-cell genomics

A focused reagent for single-cell genomics, rare-cell analysis, and cancer heterogeneity studies, engineered for high recovery and reproducibility.

Number Specifications Catalog Price Add To Cart
DZ-SC2502-24 24 Online Consult +
DZ-SC2502-96 96 Online Consult +

Product Description

YALEPIC® Single Cell WGA Kit is based on multiple displacement amplification (MDA) and is  designed for unbiased whole genome amplification from single cell and other micro samples.  The sizes of amplification products are between 2 kb to 100 kb, with a coverage greater than  95% and an average length higher than 15 kb. The products can be widely applied to whole  genome sequencing, whole exome sequencing, large fragment copy number variation analysis,  microsatellite analysis, qPCR analysis, or gene chip analysis. 

Features

  • Wide sample compatibility: suitable for animal and plant cells, bacteria or blastomeres, trophectoderm cells, sperm and other samples.
  • High coverage: after single-cell genome amplification, the coverage of more than 95% can be achieved.
  • High uniformity: can be used for >1 Mb chromosome copy number variation analysis.

Storage

Store at -20℃ and transport at ≤0℃. For long-term storage, please store at -70℃.

What types of starting samples are compatible with the YALEPIC WGA Kit?

It supports single living cells, embryo biopsy TE cells, trace amounts of peripheral blood, 10 pg-ng level trace genomic DNA, small amounts of FFPE dissociated single cells. A conventional single cell can stably amplify 2-5 microgram of genomic DNA.

How long does the entire amplification process take? Can the experiment duration be shortened?

The standard protocol completes all amplification in 3 hours: conventional lysis 30 min + pre-amplification + formal amplification. It is not recommended to arbitrarily shorten the reaction time, as this will reduce genome coverage.

Can embryo samples after lysis really be transported at room temperature? What is the maximum tolerated temperature?

Samples after cell lysis completion can be transported at room temperature at temperatures <=37 degrees C for short distances without compromising DNA integrity. This is a core advantage distinguishing this kit from conventional WGA products on the market. For long-distance transport, refrigeration is still recommended.

Can the amplification products be used directly for next-generation whole-genome sequencing (WGS)?

The product purity meets NGS library preparation requirements and can be directly used for whole-genome sequencing, exon capture sequencing, CNV copy number variation detection, SNP genotyping, and other downstream experiments.

What is the difference between the Phi29 enzyme used in this kit and the polymerase in conventional WGA kits?

It uses a directed-evolution optimized Phi29 polymerase with high fidelity and strong strand displacement activity, achieving lower amplification bias and whole-genome coverage >=95%, superior to conventional wild-type Phi29 materials.

What reagent components are included in the 96-reaction specification (catalog number DZ-SC2502-96)?

The complete set includes lysis buffer, pre-amplification buffer, Phi29 enzyme, amplification buffer, and other full reaction reagents. No additional purchase of配套 components is needed – ready for use directly on the instrument.

Will inadequate storage temperature affect the performance of the kit?

Stock solutions must be stored at -20 degrees C protected from light. Repeated freeze-thaw or prolonged room temperature storage will cause enzyme activity degradation, resulting in low amplification yield and reduced coverage.

How should amplified DNA products be stored? What is the storage period?

Amplification products should be aliquoted and stored at -20 degrees C for short-term (1 month) or at -80 degrees C for long-term (2 years). Repeated freeze-thaw should be <=3 times.

What causes amplification bands in the negative control? How to resolve?

Usually caused by consumable or workbench exogenous DNA contamination. Replace with sterile, nuclease-free centrifuge tubes, UV-sterilize the workbench, and open a fresh negative control buffer to eliminate contamination.

What factors cause single-cell amplification products below 2 microgram?

Insufficient cell lysis, starting cell degradation, or reaction temperature fluctuation. Optimize lysis incubation time and add enzymes on ice throughout the process to improve product yield.

Can the kit be used for plant single-cell whole-genome amplification?

The optimized buffer is compatible with animal/human single cells. Plant cell walls are thick and require pre-optimization of the lysis protocol. A small number of plant samples can be validated through pilot experiments.

Can the product be used for clinical PGT (preimplantation genetic testing)?

The reagent performance has been validated with PGT samples and can be used for blastocyst biopsy single-cell amplification and embryo chromosome CNV screening.

What are the advantages of the YALEPIC single-cell WGA kit compared to other single-cell WGA kits on the market?

Core advantage comparison: Enzyme type – YALEPIC uses directed-evolution Phi29 enzyme with superior uniformity; conventional kits use wild-type Phi29 with higher bias. Coverage – YALEPIC >=95%; conventional typically 80%-90%. Amplification time – YALEPIC 3 hours; conventional 4-8 hours. Transport method – YALEPIC allows room temperature transport after lysis at <=37 degrees C; conventional typically requires full -20 degrees C cold chain. Product yield - YALEPIC 2-5 microgram; conventional 1-3 microgram. Application scenarios - YALEPIC supports WGS/WES/PGT/CNV/qPCR, etc.; conventional mostly limited to qPCR/genotyping. The YALEPIC single-cell WGA kit is a new-generation single-cell WGA solution that balances high coverage, high uniformity, operational convenience, and transport flexibility.

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